Procambarus clarkii

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I5klogo4.jpg Procambarus clarkii

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People with a declared interest in Procambarus clarkii
Daniel Cattaert University of Bordeaux
Zen Faulkes The University of Texas-Pan American


Transcriptome datasets for Procambarus clarkii
Species Description No. sequences Last update
Procambarus clarkii GenBank EST division (dbEST) 4242 2455686.55 May 2011

i5K Comments for Procambarus clarkii
P. clarkii (crayfish) is widely used as a model organism in neurobiology. It has been the source of many fundamental discoveries. Even scientists in Israel import this species from the US. Moreover, it is farmed in the southern US for food. This species is largely used in Neuroscience in which molecular biology approaches would greatly benefit of a sequenced genome to discover specific sequences of receptors etc...


Procambarus clarkii have been used for decades as a model for studying synaptic plasticity, circuits, behaviour, and so forth; thus, these animals are an integral organism. Additionally, these animals have ecological significance, as some P clarkii are considered invasive species outside of Southwestern US. However, lack of sequence information for this species has inhibited research groups from progressing their studies. With the sequence known, researchers will be able to utilize widely used analytic techniques (Western blot, PCR, etc) to further their understanding of mechanisms involved with the various studied phenomenon in this preparation. For example, cellular and molecular mechanisms of synaptic plasticity are still not fully understood. With the sequence known, specific proteins and molecular players involved in plasticity can be elucidated. These can then be compared to other model organisms, such as Drosophilia and Mus musculus, to verify evolutionary similarities/differences. Molecular biology techniques, partnered with electrophysiology and histochemistry, will provide significant information with respect to short term synaptic plasticity. Although the number of current labs experimenting with crayfish is seemingly small, this is largely a result of lack of sequence information being available.

An important use of crayfish not revealed in the survey above is that this animal is used extensive in undergraduate education. Its relatively large size makes it easy to manipulate. It is cheap. It is more receptive as an experimental animals to undergraduates, than mouse or rat. Genetic information of crayfish should greatly expand its use in education.
Daniel Cattaert
Milton Charlton
Jessica Bilkey
Jen-Wei Lin


Procambarus clarkii
Red swamp crayfish


Taxonomic classification
Class: Malacostraca
Order: Decapoda
Family: Cambaridae
Genus: Procambarus
NCBI taxid: 485px-US-NLM-NCBI-Logo.png 6728
EOL taxid: eol logo grey.png 344571
Resources
Information
Research interest: Neuroscience
Nomination: i5K initiative


I5klogo4.jpg  i5K Arthropod Sequencing Initiative
 Supported by: 2 (List of supporters)



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